Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 UXT-AS1-201ENST00000590504 1525 ntBASIC21.94■■□□□ 1.1
MSH5O43196 BX276092.7-203ENST00000637198 1536 ntBASIC21.94■■□□□ 1.1
MSH5O43196 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 AC126177.1-201ENST00000547829 2218 ntBASIC21.94■■□□□ 1.1
MSH5O43196 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.94■■□□□ 1.1
MSH5O43196 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
MSH5O43196 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC21.93■■□□□ 1.1
MSH5O43196 AC019178.2-201ENST00000423595 505 ntBASIC21.93■■□□□ 1.1
MSH5O43196 GPS2P2-201ENST00000430745 888 ntBASIC21.93■■□□□ 1.1
MSH5O43196 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.93■■□□□ 1.1
MSH5O43196 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.93■■□□□ 1.1
MSH5O43196 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.93■■□□□ 1.1
MSH5O43196 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC21.93■■□□□ 1.1
MSH5O43196 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC21.93■■□□□ 1.1
MSH5O43196 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
MSH5O43196 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.93■■□□□ 1.1
MSH5O43196 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.93■■□□□ 1.1
MSH5O43196 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.93■■□□□ 1.1
MSH5O43196 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 LINC00304-203ENST00000565008 1864 ntBASIC21.93■■□□□ 1.1
MSH5O43196 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC21.93■■□□□ 1.1
MSH5O43196 AC092364.2-201ENST00000596710 2692 ntBASIC21.93■■□□□ 1.1
MSH5O43196 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC21.93■■□□□ 1.1
MSH5O43196 AC139795.3-201ENST00000606358 541 ntBASIC21.93■■□□□ 1.1
MSH5O43196 AC012467.1-201ENST00000607740 256 ntBASIC21.93■■□□□ 1.1
MSH5O43196 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSH5O43196 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MSH5O43196 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 AC078925.2-201ENST00000624013 1973 ntBASIC21.92■■□□□ 1.1
MSH5O43196 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.92■■□□□ 1.1
MSH5O43196 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSH5O43196 AC116353.5-201ENST00000638148 1699 ntBASIC21.92■■□□□ 1.1
MSH5O43196 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSH5O43196 AL358913.2-201ENST00000553881 1548 ntBASIC21.92■■□□□ 1.1
MSH5O43196 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 PSMC1P9-201ENST00000396338 1335 ntBASIC21.92■■□□□ 1.1
MSH5O43196 PSMC1P1-201ENST00000478110 1320 ntBASIC21.92■■□□□ 1.1
MSH5O43196 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 MTCO2P1-201ENST00000424648 477 ntBASIC21.92■■□□□ 1.1
MSH5O43196 AC140658.5-201ENST00000438532 169 ntBASIC21.92■■□□□ 1.1
MSH5O43196 RNF2P1-201ENST00000442955 1010 ntBASIC21.92■■□□□ 1.1
MSH5O43196 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 MTCYBP44-201ENST00000514835 823 ntBASIC21.92■■□□□ 1.1
MSH5O43196 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.92■■□□□ 1.1
MSH5O43196 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.92■■□□□ 1.1
MSH5O43196 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 AC093510.2-201ENST00000562820 896 ntBASIC21.92■■□□□ 1.1
MSH5O43196 AP005131.4-202ENST00000590468 570 ntTSL 4 BASIC21.92■■□□□ 1.1
MSH5O43196 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 AC073333.2-201ENST00000603589 769 ntBASIC21.92■■□□□ 1.1
MSH5O43196 NDE1P2-201ENST00000605569 1105 ntBASIC21.92■■□□□ 1.1
MSH5O43196 AC018638.7-201ENST00000605836 1114 ntBASIC21.92■■□□□ 1.1
MSH5O43196 AC007494.3-201ENST00000624660 743 ntBASIC21.92■■□□□ 1.1
MSH5O43196 AC132825.7-201ENST00000638744 335 ntBASIC21.92■■□□□ 1.1
MSH5O43196 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 AL365203.3-201ENST00000609742 2057 ntBASIC21.92■■□□□ 1.1
MSH5O43196 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSH5O43196 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.92■■□□□ 1.1
MSH5O43196 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSH5O43196 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
MSH5O43196 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms