Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 GAPDHP40-201ENST00000505218 1006 ntBASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 AC079316.1-201ENST00000548397 411 ntBASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 AL139384.1-201ENST00000612143 3047 ntBASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 AC024909.3-201ENST00000611513 2257 ntBASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 FAM86MP-201ENST00000340703 885 ntBASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 BRWD1P1-201ENST00000401091 371 ntBASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 RNA5SP412-201ENST00000516234 123 ntBASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 PKD1P5-201ENST00000532415 10291 ntBASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TBC1D3FA6NER0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 AC010491.1-201ENST00000563101 2797 ntBASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 AL603832.2-201ENST00000566195 2125 ntBASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TBC1D3FA6NER0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 AL513523.2-202ENST00000427283 2040 ntBASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms