Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC162PA2VCL2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 PMS2P2-201ENST00000425039 1128 ntBASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 RFPL4AP1-201ENST00000530883 850 ntBASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AC015910.1-201ENST00000579400 975 ntBASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 AC004461.2-201ENST00000629517 803 ntBASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CCDC162PA2VCL2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 AC091951.1-201ENST00000512854 2465 ntBASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 AC104581.4-201ENST00000623126 3052 ntBASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 AC126365.1-201ENST00000578585 1514 ntBASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 TOMM22P5-201ENST00000416399 439 ntBASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 AC004890.2-204ENST00000481968 304 ntBASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC162PA2VCL2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms