Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AC093909.1-201ENST00000504731 1122 ntBASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AC105233.2-201ENST00000523697 349 ntBASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AF228730.5-201ENST00000530288 346 ntBASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AP002472.1-201ENST00000577490 586 ntBASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AC068137.2-201ENST00000605408 478 ntBASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AC064836.3-201ENST00000607928 673 ntBASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 KRT8P37-201ENST00000451609 1420 ntBASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 AC104581.4-201ENST00000623126 3052 ntBASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TRAV5A0A0B4J249 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 MRPL3P1-201ENST00000400109 1033 ntBASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 AC074386.1-202ENST00000463561 864 ntBASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 AC099522.2-201ENST00000607001 744 ntBASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 Z83851.2-201ENST00000609564 659 ntBASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms