Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 TPM4P1-201ENST00000436100 807 ntBASIC13.97□□□□□ -0.17
COPS3Q9UNS2 KRT8P48-201ENST00000515599 1220 ntBASIC13.97□□□□□ -0.17
COPS3Q9UNS2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AL607033.1-201ENST00000623900 1599 ntBASIC13.96□□□□□ -0.17
COPS3Q9UNS2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AC023274.1-201ENST00000418278 595 ntBASIC13.96□□□□□ -0.17
COPS3Q9UNS2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 RN7SL589P-201ENST00000481268 310 ntBASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AC027601.4-201ENST00000611259 610 ntBASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 AC005089.1-201ENST00000619486 2241 ntBASIC13.96□□□□□ -0.17
COPS3Q9UNS2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
COPS3Q9UNS2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
COPS3Q9UNS2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COPS3Q9UNS2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
COPS3Q9UNS2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.96□□□□□ -0.18
COPS3Q9UNS2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COPS3Q9UNS2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
COPS3Q9UNS2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COPS3Q9UNS2 FGD5P1-202ENST00000614866 2498 ntBASIC13.96□□□□□ -0.18
COPS3Q9UNS2 AJ011931.1-201ENST00000618749 2492 ntBASIC13.96□□□□□ -0.18
COPS3Q9UNS2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
COPS3Q9UNS2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms