Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 AC012441.1-201ENST00000446669 685 ntBASIC16.4■□□□□ 0.22
CDH9Q9ULB4 AC004066.1-201ENST00000502488 802 ntBASIC16.4■□□□□ 0.22
CDH9Q9ULB4 AC022137.2-201ENST00000503482 481 ntBASIC16.4■□□□□ 0.22
CDH9Q9ULB4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH9Q9ULB4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.39■□□□□ 0.22
CDH9Q9ULB4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDH9Q9ULB4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 NFIC-211ENST00000641145 8399 ntBASIC16.39■□□□□ 0.21
CDH9Q9ULB4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 AP001889.1-201ENST00000525414 633 ntBASIC16.39■□□□□ 0.21
CDH9Q9ULB4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 RAB43P1-201ENST00000561790 589 ntBASIC16.39■□□□□ 0.21
CDH9Q9ULB4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 AL022328.1-201ENST00000610050 478 ntBASIC16.39■□□□□ 0.21
CDH9Q9ULB4 AP005019.2-201ENST00000615104 511 ntBASIC16.39■□□□□ 0.21
CDH9Q9ULB4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.39■□□□□ 0.21
CDH9Q9ULB4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 AC134312.5-201ENST00000568031 1313 ntBASIC16.39■□□□□ 0.21
CDH9Q9ULB4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH9Q9ULB4 AC007950.2-201ENST00000615045 2347 ntBASIC16.39■□□□□ 0.21
CDH9Q9ULB4 AC018665.1-201ENST00000622927 1362 ntBASIC16.38■□□□□ 0.21
CDH9Q9ULB4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 AC005229.1-201ENST00000392885 409 ntBASIC16.38■□□□□ 0.21
CDH9Q9ULB4 NUS1P3-201ENST00000423502 862 ntBASIC16.38■□□□□ 0.21
CDH9Q9ULB4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 KRT43P-201ENST00000434019 910 ntBASIC16.38■□□□□ 0.21
CDH9Q9ULB4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 AL355864.2-201ENST00000447420 863 ntBASIC16.38■□□□□ 0.21
CDH9Q9ULB4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 ACA64.2-201ENST00000459014 129 ntBASIC16.38■□□□□ 0.21
CDH9Q9ULB4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.38■□□□□ 0.21
CDH9Q9ULB4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms