Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HACD3Q9P035 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HACD3Q9P035 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.83■□□□□ 0.12
HACD3Q9P035 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HACD3Q9P035 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HACD3Q9P035 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.83■□□□□ 0.12
HACD3Q9P035 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.83■□□□□ 0.12
HACD3Q9P035 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HACD3Q9P035 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.83■□□□□ 0.12
HACD3Q9P035 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HACD3Q9P035 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.82■□□□□ 0.12
HACD3Q9P035 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
HACD3Q9P035 CICP13-201ENST00000422015 2789 ntBASIC15.82■□□□□ 0.12
HACD3Q9P035 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.82■□□□□ 0.12
HACD3Q9P035 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HACD3Q9P035 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.82■□□□□ 0.12
HACD3Q9P035 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
HACD3Q9P035 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 TCAF2P1-201ENST00000291129 2421 ntBASIC15.82■□□□□ 0.12
HACD3Q9P035 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.82■□□□□ 0.12
HACD3Q9P035 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HACD3Q9P035 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.82■□□□□ 0.12
HACD3Q9P035 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
HACD3Q9P035 AC009477.1-201ENST00000452936 217 ntBASIC15.82■□□□□ 0.12
HACD3Q9P035 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.82■□□□□ 0.12
HACD3Q9P035 RNA5SP421-201ENST00000516864 134 ntBASIC15.82■□□□□ 0.12
HACD3Q9P035 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.82■□□□□ 0.12
HACD3Q9P035 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.82■□□□□ 0.12
HACD3Q9P035 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.82■□□□□ 0.12
HACD3Q9P035 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.82■□□□□ 0.12
HACD3Q9P035 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.82■□□□□ 0.12
HACD3Q9P035 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.82■□□□□ 0.12
HACD3Q9P035 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HACD3Q9P035 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
HACD3Q9P035 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HACD3Q9P035 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HACD3Q9P035 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.82■□□□□ 0.12
HACD3Q9P035 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.82■□□□□ 0.12
HACD3Q9P035 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.82■□□□□ 0.12
HACD3Q9P035 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.82■□□□□ 0.12
HACD3Q9P035 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.82■□□□□ 0.12
HACD3Q9P035 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HACD3Q9P035 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
HACD3Q9P035 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.81■□□□□ 0.12
HACD3Q9P035 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HACD3Q9P035 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HACD3Q9P035 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.81■□□□□ 0.12
HACD3Q9P035 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.81■□□□□ 0.12
HACD3Q9P035 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.81■□□□□ 0.12
HACD3Q9P035 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.81■□□□□ 0.12
HACD3Q9P035 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.81■□□□□ 0.12
HACD3Q9P035 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.81■□□□□ 0.12
HACD3Q9P035 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.81■□□□□ 0.12
HACD3Q9P035 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 AC127383.1-201ENST00000444697 1800 ntBASIC15.81■□□□□ 0.12
HACD3Q9P035 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.81■□□□□ 0.12
HACD3Q9P035 AC004890.2-204ENST00000481968 304 ntBASIC15.81■□□□□ 0.12
HACD3Q9P035 AC105250.1-201ENST00000509378 2057 ntBASIC15.81■□□□□ 0.12
HACD3Q9P035 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.81■□□□□ 0.12
HACD3Q9P035 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.81■□□□□ 0.12
HACD3Q9P035 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.81■□□□□ 0.12
HACD3Q9P035 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HACD3Q9P035 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.81■□□□□ 0.12
HACD3Q9P035 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HACD3Q9P035 AC013268.4-201ENST00000637413 2228 ntBASIC15.81■□□□□ 0.12
HACD3Q9P035 TMBIM7P-203ENST00000641617 1718 ntBASIC15.81■□□□□ 0.12
HACD3Q9P035 AL109936.8-201ENST00000641772 604 ntBASIC15.81■□□□□ 0.12
HACD3Q9P035 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms