Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 AC132938.4-201ENST00000623835 848 ntBASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 AC068587.8-201ENST00000641239 219 ntBASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD1Q96PZ7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13□□□□□ -0.33
CSMD1Q96PZ7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 AP001582.1-201ENST00000525856 295 ntBASIC13□□□□□ -0.33
CSMD1Q96PZ7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13□□□□□ -0.33
CSMD1Q96PZ7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 TBC1D3J-201ENST00000620719 1426 ntBASIC13□□□□□ -0.33
CSMD1Q96PZ7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms