Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC85AQ96PX6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 AC127383.1-201ENST00000444697 1800 ntBASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 RNU1-114P-201ENST00000365297 166 ntBASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 AC078819.1-201ENST00000547454 765 ntBASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 AC012085.1-201ENST00000548270 765 ntBASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 BX539320.1-201ENST00000623759 877 ntBASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC85AQ96PX6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AL355994.2-201ENST00000447882 704 ntBASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 RPL13AP20-201ENST00000459725 609 ntBASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AC025279.2-201ENST00000569730 653 ntBASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AC010328.2-201ENST00000597698 1111 ntBASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AP005019.2-201ENST00000615104 511 ntBASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 RHOXF1P1-202ENST00000635473 501 ntBASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 KRT8P35-201ENST00000483942 1338 ntBASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC85AQ96PX6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 AL391005.1-201ENST00000623953 2435 ntBASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms