Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 GAPDHP40-201ENST00000505218 1006 ntBASIC15.61■□□□□ 0.09
SIPA1Q96FS4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 BX539320.1-201ENST00000623759 877 ntBASIC15.61■□□□□ 0.09
SIPA1Q96FS4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SIPA1Q96FS4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 AC069224.1-201ENST00000566372 1715 ntBASIC15.6■□□□□ 0.09
SIPA1Q96FS4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 AC025279.2-201ENST00000569730 653 ntBASIC15.6■□□□□ 0.09
SIPA1Q96FS4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 AC008687.7-202ENST00000637404 953 ntBASIC15.6■□□□□ 0.09
SIPA1Q96FS4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIPA1Q96FS4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 CNN2P8-201ENST00000421872 913 ntBASIC15.59■□□□□ 0.09
SIPA1Q96FS4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 PFN1P12-201ENST00000455938 534 ntBASIC15.59■□□□□ 0.09
SIPA1Q96FS4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 AC023310.1-201ENST00000554836 735 ntBASIC15.59■□□□□ 0.09
SIPA1Q96FS4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIPA1Q96FS4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms