Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 GHSR-202ENST00000427970 912 ntBASIC18.27■□□□□ 0.52
STAG1Q8WVM7 TTTY23B-201ENST00000442790 549 ntBASIC18.27■□□□□ 0.52
STAG1Q8WVM7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 ENPP7P5-201ENST00000541031 1031 ntBASIC18.27■□□□□ 0.52
STAG1Q8WVM7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 AL162274.1-201ENST00000617191 1098 ntBASIC18.27■□□□□ 0.52
STAG1Q8WVM7 CU634019.7-201ENST00000624153 1185 ntBASIC18.27■□□□□ 0.52
STAG1Q8WVM7 FP236241.2-201ENST00000624906 1185 ntBASIC18.27■□□□□ 0.52
STAG1Q8WVM7 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.27■□□□□ 0.52
STAG1Q8WVM7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.27■□□□□ 0.52
STAG1Q8WVM7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
STAG1Q8WVM7 CICP11-201ENST00000434745 2827 ntBASIC18.27■□□□□ 0.51
STAG1Q8WVM7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.27■□□□□ 0.51
STAG1Q8WVM7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 ARSEP1-201ENST00000420443 635 ntBASIC18.26■□□□□ 0.51
STAG1Q8WVM7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 GPR53P-205ENST00000457298 1084 ntBASIC18.26■□□□□ 0.51
STAG1Q8WVM7 AC106886.1-201ENST00000568660 600 ntBASIC18.26■□□□□ 0.51
STAG1Q8WVM7 CLUHP6-201ENST00000580789 941 ntBASIC18.26■□□□□ 0.51
STAG1Q8WVM7 AC005252.2-201ENST00000624630 1141 ntBASIC18.26■□□□□ 0.51
STAG1Q8WVM7 AC126365.1-201ENST00000578585 1514 ntBASIC18.26■□□□□ 0.51
STAG1Q8WVM7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
STAG1Q8WVM7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 AC093525.8-201ENST00000624099 1342 ntBASIC18.25■□□□□ 0.51
STAG1Q8WVM7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 AC007389.4-201ENST00000454674 793 ntBASIC18.25■□□□□ 0.51
STAG1Q8WVM7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.25■□□□□ 0.51
STAG1Q8WVM7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms