Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 AC005225.4-201ENST00000557330 545 ntBASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 AL138799.1-201ENST00000448213 1675 ntBASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 AC112693.3-201ENST00000624819 1983 ntBASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAM1L1Q8N609 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 COX5BP8-201ENST00000416911 349 ntBASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 CU634019.7-201ENST00000624153 1185 ntBASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 FP236241.2-201ENST00000624906 1185 ntBASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAM1L1Q8N609 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAM1L1Q8N609 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.33■□□□□ 0.05
TRAM1L1Q8N609 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAM1L1Q8N609 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAM1L1Q8N609 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAM1L1Q8N609 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAM1L1Q8N609 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 C18orf15-201ENST00000623680 2534 ntBASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 NME2P1-201ENST00000426182 414 ntBASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 AC004066.1-201ENST00000502488 802 ntBASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 AC012645.4-201ENST00000610691 1061 ntBASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms