Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 AC093520.2-201ENST00000561830 333 ntBASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 AC026120.1-201ENST00000611536 926 ntBASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 AL021920.2-201ENST00000624828 1351 ntBASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 AC244107.1-201ENST00000442033 332 ntBASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 DUX4L27-201ENST00000554796 1261 ntBASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 AC138761.1-201ENST00000584393 385 ntBASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 Z92544.3-201ENST00000624747 417 ntBASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 BEND3P1-201ENST00000421591 1944 ntBASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
FOXR1Q6PIV2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 AL627223.1-201ENST00000416693 442 ntBASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 POU5F1P6-201ENST00000466990 990 ntBASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms