Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF20Q5VTR2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RNF20Q5VTR2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF20Q5VTR2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
RNF20Q5VTR2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF20Q5VTR2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF20Q5VTR2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 TOMM22P5-201ENST00000416399 439 ntBASIC18.64■□□□□ 0.57
RNF20Q5VTR2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 AC006538.3-201ENST00000612495 578 ntBASIC18.64■□□□□ 0.57
RNF20Q5VTR2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF20Q5VTR2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 AC044860.1-202ENST00000559481 777 ntBASIC18.63■□□□□ 0.57
RNF20Q5VTR2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 AL136379.1-201ENST00000623471 2642 ntBASIC18.63■□□□□ 0.57
RNF20Q5VTR2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF20Q5VTR2 AC023024.2-201ENST00000623561 1993 ntBASIC18.62■□□□□ 0.57
RNF20Q5VTR2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms