Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 AC004066.1-201ENST00000502488 802 ntBASIC18.9■□□□□ 0.62
TNNI3KQ59H18 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 BX539320.1-201ENST00000623759 877 ntBASIC18.9■□□□□ 0.62
TNNI3KQ59H18 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TNNI3KQ59H18 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TNNI3KQ59H18 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.89■□□□□ 0.62
TNNI3KQ59H18 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TNNI3KQ59H18 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 ACKR1-201ENST00000368121 1240 ntBASIC18.89■□□□□ 0.61
TNNI3KQ59H18 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 GHSR-202ENST00000427970 912 ntBASIC18.89■□□□□ 0.61
TNNI3KQ59H18 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 AC022137.2-201ENST00000503482 481 ntBASIC18.89■□□□□ 0.61
TNNI3KQ59H18 AC068587.3-201ENST00000526613 355 ntBASIC18.89■□□□□ 0.61
TNNI3KQ59H18 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 AC009486.1-201ENST00000569860 813 ntBASIC18.89■□□□□ 0.61
TNNI3KQ59H18 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.89■□□□□ 0.61
TNNI3KQ59H18 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 AC079776.1-201ENST00000401540 1152 ntBASIC18.88■□□□□ 0.61
TNNI3KQ59H18 AC012441.1-201ENST00000446669 685 ntBASIC18.88■□□□□ 0.61
TNNI3KQ59H18 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 SLC25A47P1-201ENST00000531577 414 ntBASIC18.88■□□□□ 0.61
TNNI3KQ59H18 PTP4A1P2-201ENST00000546033 454 ntBASIC18.88■□□□□ 0.61
TNNI3KQ59H18 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNNI3KQ59H18 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms