Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 AC112504.1-201ENST00000623415 1841 ntBASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 FAM8A4P-201ENST00000435433 1213 ntBASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 AC126915.1-201ENST00000522847 1038 ntBASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 AC020914.3-201ENST00000594712 304 ntBASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 AC084364.1-201ENST00000551967 1556 ntBASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM71Q2Q1W2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM71Q2Q1W2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM71Q2Q1W2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM71Q2Q1W2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM71Q2Q1W2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
TRIM71Q2Q1W2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 COX5BP1-201ENST00000507622 393 ntBASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 AC073413.1-201ENST00000603927 732 ntBASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 AL662844.4-201ENST00000606367 2838 ntBASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 AC046158.3-201ENST00000624947 2558 ntBASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM71Q2Q1W2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 AC092506.1-202ENST00000401022 528 ntBASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 AC079178.1-201ENST00000420915 656 ntBASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM71Q2Q1W2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms