Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COL16A1Q07092 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COL16A1Q07092 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC20.31■□□□□ 0.84
COL16A1Q07092 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC20.31■□□□□ 0.84
COL16A1Q07092 AC007952.4-201ENST00000573866 637 ntBASIC20.31■□□□□ 0.84
COL16A1Q07092 AC133540.1-201ENST00000620845 1019 ntBASIC20.31■□□□□ 0.84
COL16A1Q07092 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.3■□□□□ 0.84
COL16A1Q07092 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COL16A1Q07092 AL138725.1-201ENST00000407347 1314 ntBASIC20.3■□□□□ 0.84
COL16A1Q07092 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COL16A1Q07092 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 HLA-DMA-203ENST00000395305 777 ntBASIC20.3■□□□□ 0.84
COL16A1Q07092 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.3■□□□□ 0.84
COL16A1Q07092 AC114947.1-202ENST00000514136 344 ntBASIC20.3■□□□□ 0.84
COL16A1Q07092 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 ABHD17AP9-201ENST00000561925 548 ntBASIC20.3■□□□□ 0.84
COL16A1Q07092 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC20.3■□□□□ 0.84
COL16A1Q07092 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.3■□□□□ 0.84
COL16A1Q07092 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 AC002044.2-201ENST00000624910 970 ntBASIC20.3■□□□□ 0.84
COL16A1Q07092 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
COL16A1Q07092 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL16A1Q07092 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.29■□□□□ 0.84
COL16A1Q07092 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL16A1Q07092 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL16A1Q07092 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL16A1Q07092 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
COL16A1Q07092 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL16A1Q07092 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
COL16A1Q07092 SERBP1P2-201ENST00000436888 1164 ntBASIC20.29■□□□□ 0.84
COL16A1Q07092 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL16A1Q07092 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.29■□□□□ 0.84
COL16A1Q07092 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COL16A1Q07092 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC20.29■□□□□ 0.84
COL16A1Q07092 TP53-221ENST00000615910 1149 ntTSL 5 BASIC20.29■□□□□ 0.84
COL16A1Q07092 AC233280.19-201ENST00000633223 136 ntBASIC20.29■□□□□ 0.84
COL16A1Q07092 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL16A1Q07092 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL16A1Q07092 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL16A1Q07092 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COL16A1Q07092 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC20.28■□□□□ 0.84
COL16A1Q07092 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COL16A1Q07092 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL16A1Q07092 HLA-DQB1-202ENST00000399079 1501 ntBASIC20.28■□□□□ 0.84
COL16A1Q07092 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 AC144522.1-201ENST00000625111 1658 ntBASIC20.28■□□□□ 0.84
COL16A1Q07092 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COL16A1Q07092 GUSBP10-201ENST00000417412 665 ntBASIC20.28■□□□□ 0.84
COL16A1Q07092 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL16A1Q07092 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL16A1Q07092 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL16A1Q07092 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL16A1Q07092 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL16A1Q07092 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL16A1Q07092 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL16A1Q07092 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL16A1Q07092 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL16A1Q07092 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL16A1Q07092 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL16A1Q07092 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL16A1Q07092 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL16A1Q07092 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC20.27■□□□□ 0.84
COL16A1Q07092 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL16A1Q07092 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.27■□□□□ 0.84
COL16A1Q07092 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL16A1Q07092 XBP1P1-201ENST00000436573 652 ntBASIC20.27■□□□□ 0.84
COL16A1Q07092 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
COL16A1Q07092 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC20.27■□□□□ 0.84
COL16A1Q07092 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC20.27■□□□□ 0.84
COL16A1Q07092 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.27■□□□□ 0.84
COL16A1Q07092 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
COL16A1Q07092 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC20.27■□□□□ 0.84
COL16A1Q07092 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC20.27■□□□□ 0.84
COL16A1Q07092 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL16A1Q07092 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COL16A1Q07092 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL16A1Q07092 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL16A1Q07092 AL672207.1-201ENST00000328462 1570 ntBASIC20.27■□□□□ 0.84
COL16A1Q07092 REXO1L5P-201ENST00000622260 2098 ntBASIC20.27■□□□□ 0.84
COL16A1Q07092 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms