Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AL645939.2-201ENST00000427340 991 ntBASIC12.79□□□□□ -0.36
SPCS3P61009 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.79□□□□□ -0.36
SPCS3P61009 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.79□□□□□ -0.36
SPCS3P61009 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.79□□□□□ -0.36
SPCS3P61009 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.79□□□□□ -0.36
SPCS3P61009 RNA5SP415-201ENST00000517246 115 ntBASIC12.79□□□□□ -0.36
SPCS3P61009 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SPCS3P61009 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.79□□□□□ -0.36
SPCS3P61009 MIR4313-201ENST00000580760 101 ntBASIC12.79□□□□□ -0.36
SPCS3P61009 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.79□□□□□ -0.36
SPCS3P61009 AC116407.3-201ENST00000623905 1129 ntBASIC12.79□□□□□ -0.36
SPCS3P61009 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SPCS3P61009 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.79□□□□□ -0.36
SPCS3P61009 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SPCS3P61009 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.79□□□□□ -0.36
SPCS3P61009 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.79□□□□□ -0.36
SPCS3P61009 REXO1L1P-202ENST00000608646 1974 ntBASIC12.79□□□□□ -0.36
SPCS3P61009 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPCS3P61009 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPCS3P61009 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.79□□□□□ -0.36
SPCS3P61009 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.79□□□□□ -0.36
SPCS3P61009 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPCS3P61009 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SPCS3P61009 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
SPCS3P61009 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPCS3P61009 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPCS3P61009 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.79□□□□□ -0.36
SPCS3P61009 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPCS3P61009 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.79□□□□□ -0.36
SPCS3P61009 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SPCS3P61009 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPCS3P61009 AC127383.1-201ENST00000444697 1800 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SPCS3P61009 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SPCS3P61009 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SPCS3P61009 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.78□□□□□ -0.36
SPCS3P61009 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.78□□□□□ -0.36
SPCS3P61009 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.78□□□□□ -0.36
SPCS3P61009 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.78□□□□□ -0.36
SPCS3P61009 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.78□□□□□ -0.36
SPCS3P61009 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.78□□□□□ -0.36
SPCS3P61009 AC079776.4-201ENST00000511039 504 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.78□□□□□ -0.36
SPCS3P61009 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 AC073389.1-201ENST00000595595 795 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 MIR7706-201ENST00000613747 67 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.78□□□□□ -0.36
SPCS3P61009 SPTSSB-204ENST00000617024 1292 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.78□□□□□ -0.36
SPCS3P61009 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.78□□□□□ -0.36
SPCS3P61009 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 BCAR1-209ENST00000546196 1340 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 AC025580.3-201ENST00000617932 1424 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.78□□□□□ -0.36
SPCS3P61009 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.78□□□□□ -0.36
SPCS3P61009 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.78□□□□□ -0.36
SPCS3P61009 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPCS3P61009 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SPCS3P61009 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SPCS3P61009 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SPCS3P61009 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SPCS3P61009 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SPCS3P61009 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SPCS3P61009 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms