Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 OR8S1-201ENST00000310194 1080 ntBASIC14.56□□□□□ -0.08
EFNA3P52797 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 C1QBPP1-201ENST00000400117 770 ntBASIC14.56□□□□□ -0.08
EFNA3P52797 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 AC007389.4-201ENST00000454674 793 ntBASIC14.56□□□□□ -0.08
EFNA3P52797 CROCCP4-201ENST00000457096 498 ntBASIC14.56□□□□□ -0.08
EFNA3P52797 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.56□□□□□ -0.08
EFNA3P52797 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.56□□□□□ -0.08
EFNA3P52797 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.56□□□□□ -0.08
EFNA3P52797 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
EFNA3P52797 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
EFNA3P52797 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.56□□□□□ -0.08
EFNA3P52797 AC025181.2-201ENST00000606994 802 ntBASIC14.56□□□□□ -0.08
EFNA3P52797 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.56□□□□□ -0.08
EFNA3P52797 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.56□□□□□ -0.08
EFNA3P52797 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
EFNA3P52797 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.55□□□□□ -0.08
EFNA3P52797 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
EFNA3P52797 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.55□□□□□ -0.08
EFNA3P52797 ARSEP1-201ENST00000420443 635 ntBASIC14.55□□□□□ -0.08
EFNA3P52797 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
EFNA3P52797 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
EFNA3P52797 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.55□□□□□ -0.08
EFNA3P52797 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
EFNA3P52797 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.55□□□□□ -0.08
EFNA3P52797 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.55□□□□□ -0.08
EFNA3P52797 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.55□□□□□ -0.08
EFNA3P52797 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.55□□□□□ -0.08
EFNA3P52797 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.55□□□□□ -0.08
EFNA3P52797 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.55□□□□□ -0.08
EFNA3P52797 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
EFNA3P52797 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
EFNA3P52797 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.55□□□□□ -0.08
EFNA3P52797 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 AC084364.1-201ENST00000551967 1556 ntBASIC14.55□□□□□ -0.08
EFNA3P52797 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.55□□□□□ -0.08
EFNA3P52797 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.55□□□□□ -0.08
EFNA3P52797 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.55□□□□□ -0.08
EFNA3P52797 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.55□□□□□ -0.08
EFNA3P52797 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.55□□□□□ -0.08
EFNA3P52797 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
EFNA3P52797 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms