Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.48□□□□□ -0.25
HCFC1P51610 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 AC018735.1-201ENST00000437208 1502 ntBASIC13.48□□□□□ -0.25
HCFC1P51610 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.48□□□□□ -0.25
HCFC1P51610 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 FXNP2-201ENST00000411625 547 ntBASIC13.48□□□□□ -0.25
HCFC1P51610 HINT2P1-201ENST00000419438 481 ntBASIC13.48□□□□□ -0.25
HCFC1P51610 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.48□□□□□ -0.25
HCFC1P51610 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.48□□□□□ -0.25
HCFC1P51610 UPF3AP2-201ENST00000457924 1132 ntBASIC13.48□□□□□ -0.25
HCFC1P51610 SERPINA13P-202ENST00000478994 924 ntBASIC13.48□□□□□ -0.25
HCFC1P51610 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
HCFC1P51610 HIST2H2BC-201ENST00000498492 580 ntBASIC13.48□□□□□ -0.25
HCFC1P51610 AP001258.2-201ENST00000529891 490 ntBASIC13.48□□□□□ -0.25
HCFC1P51610 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.48□□□□□ -0.25
HCFC1P51610 MIR3619-201ENST00000579667 83 ntBASIC13.48□□□□□ -0.25
HCFC1P51610 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.48□□□□□ -0.25
HCFC1P51610 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
HCFC1P51610 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HCFC1P51610 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.48□□□□□ -0.25
HCFC1P51610 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.48□□□□□ -0.25
HCFC1P51610 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.48□□□□□ -0.25
HCFC1P51610 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HCFC1P51610 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.48□□□□□ -0.25
HCFC1P51610 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 KRT8P19-201ENST00000551916 1455 ntBASIC13.48□□□□□ -0.25
HCFC1P51610 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HCFC1P51610 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.48□□□□□ -0.25
HCFC1P51610 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HCFC1P51610 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.47□□□□□ -0.25
HCFC1P51610 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
HCFC1P51610 AL354877.1-201ENST00000424412 413 ntBASIC13.47□□□□□ -0.25
HCFC1P51610 AC005077.2-201ENST00000449786 690 ntBASIC13.47□□□□□ -0.25
HCFC1P51610 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.47□□□□□ -0.25
HCFC1P51610 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.47□□□□□ -0.25
HCFC1P51610 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.47□□□□□ -0.25
HCFC1P51610 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.47□□□□□ -0.25
HCFC1P51610 AP005019.2-201ENST00000615104 511 ntBASIC13.47□□□□□ -0.25
HCFC1P51610 AL645728.2-202ENST00000641679 227 ntBASIC13.47□□□□□ -0.25
HCFC1P51610 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 AC010491.1-201ENST00000563101 2797 ntBASIC13.47□□□□□ -0.25
HCFC1P51610 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.47□□□□□ -0.25
HCFC1P51610 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.47□□□□□ -0.25
HCFC1P51610 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.47□□□□□ -0.25
HCFC1P51610 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.47□□□□□ -0.25
HCFC1P51610 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.47□□□□□ -0.25
HCFC1P51610 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.47□□□□□ -0.25
HCFC1P51610 EEF1DP1-201ENST00000585891 896 ntBASIC13.47□□□□□ -0.25
HCFC1P51610 AC016629.1-201ENST00000596579 586 ntBASIC13.47□□□□□ -0.25
HCFC1P51610 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.47□□□□□ -0.25
HCFC1P51610 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
HCFC1P51610 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.47□□□□□ -0.25
HCFC1P51610 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms