Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.76□□□□□ -0.05
CLK1P49759 LINC00528-201ENST00000600723 2160 ntBASIC14.76□□□□□ -0.05
CLK1P49759 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLK1P49759 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.76□□□□□ -0.05
CLK1P49759 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 MIR346-201ENST00000362234 95 ntBASIC14.76□□□□□ -0.05
CLK1P49759 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.76□□□□□ -0.05
CLK1P49759 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.76□□□□□ -0.05
CLK1P49759 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.76□□□□□ -0.05
CLK1P49759 ALG1L5P-201ENST00000482043 771 ntBASIC14.76□□□□□ -0.05
CLK1P49759 IGHV3-62-201ENST00000520057 340 ntBASIC14.76□□□□□ -0.05
CLK1P49759 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.76□□□□□ -0.05
CLK1P49759 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLK1P49759 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.76□□□□□ -0.05
CLK1P49759 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.76□□□□□ -0.05
CLK1P49759 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.76□□□□□ -0.05
CLK1P49759 AC084121.4-201ENST00000641598 221 ntBASIC14.76□□□□□ -0.05
CLK1P49759 AF228730.8-201ENST00000642140 221 ntBASIC14.76□□□□□ -0.05
CLK1P49759 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.75□□□□□ -0.05
CLK1P49759 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 CICP23-201ENST00000605013 2741 ntBASIC14.75□□□□□ -0.05
CLK1P49759 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.75□□□□□ -0.05
CLK1P49759 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.75□□□□□ -0.05
CLK1P49759 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.75□□□□□ -0.05
CLK1P49759 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.75□□□□□ -0.05
CLK1P49759 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.75□□□□□ -0.05
CLK1P49759 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
CLK1P49759 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLK1P49759 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.75□□□□□ -0.05
CLK1P49759 AC079140.1-201ENST00000508039 487 ntBASIC14.75□□□□□ -0.05
CLK1P49759 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.75□□□□□ -0.05
CLK1P49759 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.75□□□□□ -0.05
CLK1P49759 LINC01225-203ENST00000563550 1244 ntBASIC14.75□□□□□ -0.05
CLK1P49759 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 AC024267.1-201ENST00000582320 895 ntBASIC14.75□□□□□ -0.05
CLK1P49759 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 AC105339.1-204ENST00000636249 355 ntBASIC14.75□□□□□ -0.05
CLK1P49759 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLK1P49759 AL589702.1-201ENST00000641229 1509 ntBASIC14.75□□□□□ -0.05
CLK1P49759 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CLK1P49759 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLK1P49759 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLK1P49759 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLK1P49759 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.75□□□□□ -0.05
CLK1P49759 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLK1P49759 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.74□□□□□ -0.05
CLK1P49759 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLK1P49759 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms