Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 FAM8A3P-201ENST00000427218 844 ntBASIC16.34■□□□□ 0.21
SLC1A1P43005 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC1A1P43005 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 AC069262.1-201ENST00000539058 672 ntBASIC16.34■□□□□ 0.21
SLC1A1P43005 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC1A1P43005 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SLC1A1P43005 AC025048.3-201ENST00000590609 569 ntBASIC16.34■□□□□ 0.21
SLC1A1P43005 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 AC005702.4-201ENST00000618393 416 ntBASIC16.34■□□□□ 0.21
SLC1A1P43005 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC1A1P43005 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SLC1A1P43005 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC1A1P43005 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC1A1P43005 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A1P43005 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC1A1P43005 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC1A1P43005 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC1A1P43005 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SLC1A1P43005 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A1P43005 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
SLC1A1P43005 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC1A1P43005 AC007292.2-201ENST00000593524 1812 ntBASIC16.33■□□□□ 0.21
SLC1A1P43005 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.33■□□□□ 0.21
SLC1A1P43005 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A1P43005 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC1A1P43005 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A1P43005 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A1P43005 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A1P43005 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SLC1A1P43005 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SLC1A1P43005 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SLC1A1P43005 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC1A1P43005 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC1A1P43005 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SLC1A1P43005 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC1A1P43005 AP006288.1-201ENST00000446065 395 ntBASIC16.33■□□□□ 0.2
SLC1A1P43005 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 HLA-V-204ENST00000476601 1289 ntBASIC16.33■□□□□ 0.2
SLC1A1P43005 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC1A1P43005 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC1A1P43005 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC1A1P43005 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 LINC00628-201ENST00000628516 1289 ntBASIC16.33■□□□□ 0.2
SLC1A1P43005 AL645728.2-202ENST00000641679 227 ntBASIC16.33■□□□□ 0.2
SLC1A1P43005 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SLC1A1P43005 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SLC1A1P43005 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SLC1A1P43005 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
SLC1A1P43005 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
SLC1A1P43005 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC1A1P43005 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC1A1P43005 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC1A1P43005 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A1P43005 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC1A1P43005 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
SLC1A1P43005 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC1A1P43005 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A1P43005 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A1P43005 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SLC1A1P43005 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC1A1P43005 RPL37AP1-201ENST00000412502 279 ntBASIC16.32■□□□□ 0.2
SLC1A1P43005 AC015922.1-201ENST00000421102 1152 ntBASIC16.32■□□□□ 0.2
SLC1A1P43005 CNN2P11-201ENST00000429351 262 ntBASIC16.32■□□□□ 0.2
SLC1A1P43005 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC1A1P43005 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A1P43005 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A1P43005 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SLC1A1P43005 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC1A1P43005 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A1P43005 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms