Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 AC008738.7-201ENST00000609744 511 ntBASIC15.76■□□□□ 0.11
HLA-DPA1P20036 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
HLA-DPA1P20036 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 AC126365.1-201ENST00000578585 1514 ntBASIC15.75■□□□□ 0.11
HLA-DPA1P20036 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 RNA5SP421-201ENST00000516864 134 ntBASIC15.75■□□□□ 0.11
HLA-DPA1P20036 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 AC135586.1-201ENST00000539323 574 ntBASIC15.75■□□□□ 0.11
HLA-DPA1P20036 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 AL109954.1-202ENST00000564051 2148 ntBASIC15.75■□□□□ 0.11
HLA-DPA1P20036 AC011467.4-201ENST00000594891 528 ntBASIC15.75■□□□□ 0.11
HLA-DPA1P20036 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPA1P20036 KRT8P44-201ENST00000441609 1350 ntBASIC15.75■□□□□ 0.11
HLA-DPA1P20036 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 AL121723.1-201ENST00000445194 1519 ntBASIC15.74■□□□□ 0.11
HLA-DPA1P20036 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DPA1P20036 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms