Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.63■□□□□ 0.09
MMP2P08253 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.63■□□□□ 0.09
MMP2P08253 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
MMP2P08253 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
MMP2P08253 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MMP2P08253 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MMP2P08253 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.62■□□□□ 0.09
MMP2P08253 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.62■□□□□ 0.09
MMP2P08253 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
MMP2P08253 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.62■□□□□ 0.09
MMP2P08253 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.62■□□□□ 0.09
MMP2P08253 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MMP2P08253 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.62■□□□□ 0.09
MMP2P08253 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.62■□□□□ 0.09
MMP2P08253 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.62■□□□□ 0.09
MMP2P08253 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.62■□□□□ 0.09
MMP2P08253 ELK1P1-201ENST00000485699 580 ntBASIC15.62■□□□□ 0.09
MMP2P08253 TERF1P3-201ENST00000505638 1227 ntBASIC15.62■□□□□ 0.09
MMP2P08253 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.62■□□□□ 0.09
MMP2P08253 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.62■□□□□ 0.09
MMP2P08253 AC092552.1-201ENST00000547243 906 ntBASIC15.62■□□□□ 0.09
MMP2P08253 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.62■□□□□ 0.09
MMP2P08253 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 AC107373.2-201ENST00000607735 490 ntBASIC15.62■□□□□ 0.09
MMP2P08253 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MMP2P08253 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MMP2P08253 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.62■□□□□ 0.09
MMP2P08253 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MMP2P08253 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.62■□□□□ 0.09
MMP2P08253 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.62■□□□□ 0.09
MMP2P08253 TCAF2P1-201ENST00000291129 2421 ntBASIC15.62■□□□□ 0.09
MMP2P08253 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.62■□□□□ 0.09
MMP2P08253 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.61■□□□□ 0.09
MMP2P08253 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.61■□□□□ 0.09
MMP2P08253 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MMP2P08253 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.61■□□□□ 0.09
MMP2P08253 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 AP000845.1-201ENST00000581677 2131 ntBASIC15.61■□□□□ 0.09
MMP2P08253 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.61■□□□□ 0.09
MMP2P08253 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.61■□□□□ 0.09
MMP2P08253 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.61■□□□□ 0.09
MMP2P08253 MYCLP2-201ENST00000449268 967 ntBASIC15.61■□□□□ 0.09
MMP2P08253 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.61■□□□□ 0.09
MMP2P08253 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.61■□□□□ 0.09
MMP2P08253 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.61■□□□□ 0.09
MMP2P08253 WASH4P-201ENST00000564273 1246 ntBASIC15.61■□□□□ 0.09
MMP2P08253 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.61■□□□□ 0.09
MMP2P08253 CTBP2P3-201ENST00000585629 1255 ntBASIC15.61■□□□□ 0.09
MMP2P08253 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.61■□□□□ 0.09
MMP2P08253 AC092364.2-202ENST00000597012 1073 ntBASIC15.61■□□□□ 0.09
MMP2P08253 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.61■□□□□ 0.09
MMP2P08253 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.61■□□□□ 0.09
MMP2P08253 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
MMP2P08253 AC007431.3-201ENST00000623221 587 ntBASIC15.61■□□□□ 0.09
MMP2P08253 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms