Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.33■□□□□ 0.2
RB1P06400 AC022616.1-201ENST00000518688 554 ntBASIC16.33■□□□□ 0.2
RB1P06400 AC022217.1-201ENST00000521069 738 ntBASIC16.33■□□□□ 0.2
RB1P06400 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.33■□□□□ 0.2
RB1P06400 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.33■□□□□ 0.2
RB1P06400 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.33■□□□□ 0.2
RB1P06400 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.33■□□□□ 0.2
RB1P06400 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.33■□□□□ 0.2
RB1P06400 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.33■□□□□ 0.2
RB1P06400 MIR3907-201ENST00000579424 151 ntBASIC16.33■□□□□ 0.2
RB1P06400 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.33■□□□□ 0.2
RB1P06400 AL645939.5-201ENST00000606834 243 ntBASIC16.33■□□□□ 0.2
RB1P06400 AP001002.3-201ENST00000623482 206 ntBASIC16.33■□□□□ 0.2
RB1P06400 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RB1P06400 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RB1P06400 KRT8P29-201ENST00000420409 1371 ntBASIC16.33■□□□□ 0.2
RB1P06400 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.33■□□□□ 0.2
RB1P06400 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.33■□□□□ 0.2
RB1P06400 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RB1P06400 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RB1P06400 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RB1P06400 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.33■□□□□ 0.2
RB1P06400 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RB1P06400 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
RB1P06400 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RB1P06400 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.33■□□□□ 0.2
RB1P06400 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RB1P06400 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RB1P06400 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RB1P06400 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RB1P06400 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.32■□□□□ 0.2
RB1P06400 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RB1P06400 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RB1P06400 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RB1P06400 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.32■□□□□ 0.2
RB1P06400 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.32■□□□□ 0.2
RB1P06400 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RB1P06400 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.32■□□□□ 0.2
RB1P06400 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RB1P06400 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.32■□□□□ 0.2
RB1P06400 LDHBP1-201ENST00000455730 1119 ntBASIC16.32■□□□□ 0.2
RB1P06400 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RB1P06400 AC134698.3-201ENST00000523880 214 ntBASIC16.32■□□□□ 0.2
RB1P06400 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.32■□□□□ 0.2
RB1P06400 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.32■□□□□ 0.2
RB1P06400 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.32■□□□□ 0.2
RB1P06400 AL158070.2-201ENST00000623713 1621 ntBASIC16.32■□□□□ 0.2
RB1P06400 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.32■□□□□ 0.2
RB1P06400 AL645728.2-202ENST00000641679 227 ntBASIC16.32■□□□□ 0.2
RB1P06400 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RB1P06400 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RB1P06400 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RB1P06400 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RB1P06400 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RB1P06400 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.31■□□□□ 0.2
RB1P06400 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.31■□□□□ 0.2
RB1P06400 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RB1P06400 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.31■□□□□ 0.2
RB1P06400 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.31■□□□□ 0.2
RB1P06400 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RB1P06400 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.31■□□□□ 0.2
RB1P06400 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 KRT8P4-201ENST00000509735 1454 ntBASIC16.31■□□□□ 0.2
RB1P06400 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.31■□□□□ 0.2
RB1P06400 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.31■□□□□ 0.2
RB1P06400 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 DPM3-202ENST00000368399 517 ntBASIC16.31■□□□□ 0.2
RB1P06400 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RB1P06400 MIR33B-201ENST00000385104 96 ntBASIC16.31■□□□□ 0.2
RB1P06400 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 AL136309.1-201ENST00000403917 691 ntBASIC16.31■□□□□ 0.2
RB1P06400 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 EIF3FP3-201ENST00000434851 1086 ntBASIC16.31■□□□□ 0.2
RB1P06400 HIST2H2BB-201ENST00000449108 381 ntBASIC16.31■□□□□ 0.2
RB1P06400 AC021723.1-201ENST00000486306 515 ntBASIC16.31■□□□□ 0.2
RB1P06400 AC100850.1-201ENST00000506768 649 ntBASIC16.31■□□□□ 0.2
RB1P06400 AL391280.1-201ENST00000506969 1062 ntBASIC16.31■□□□□ 0.2
RB1P06400 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.31■□□□□ 0.2
RB1P06400 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RB1P06400 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.31■□□□□ 0.2
RB1P06400 AC005730.2-201ENST00000564549 1184 ntBASIC16.31■□□□□ 0.2
RB1P06400 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.31■□□□□ 0.2
RB1P06400 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RB1P06400 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.31■□□□□ 0.2
RB1P06400 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RB1P06400 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.31■□□□□ 0.2
RB1P06400 PKD1P5-201ENST00000532415 10291 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms