Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.88□□□□□ -0.19
APOC1P02654 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 KRT18P32-201ENST00000424695 1287 ntBASIC13.88□□□□□ -0.19
APOC1P02654 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.88□□□□□ -0.19
APOC1P02654 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.88□□□□□ -0.19
APOC1P02654 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 AC105339.1-204ENST00000636249 355 ntBASIC13.88□□□□□ -0.19
APOC1P02654 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 AC079781.5-202ENST00000641784 3743 ntBASIC13.88□□□□□ -0.19
APOC1P02654 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.88□□□□□ -0.19
APOC1P02654 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
APOC1P02654 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
APOC1P02654 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 AC105250.1-201ENST00000509378 2057 ntBASIC13.87□□□□□ -0.19
APOC1P02654 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.87□□□□□ -0.19
APOC1P02654 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
APOC1P02654 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOC1P02654 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.87□□□□□ -0.19
APOC1P02654 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.87□□□□□ -0.19
APOC1P02654 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.87□□□□□ -0.19
APOC1P02654 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.87□□□□□ -0.19
APOC1P02654 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.87□□□□□ -0.19
APOC1P02654 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 AP000344.2-201ENST00000512987 629 ntBASIC13.87□□□□□ -0.19
APOC1P02654 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 AC022145.2-201ENST00000598203 171 ntBASIC13.87□□□□□ -0.19
APOC1P02654 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.87□□□□□ -0.19
APOC1P02654 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.87□□□□□ -0.19
APOC1P02654 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOC1P02654 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC1P02654 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC1P02654 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
APOC1P02654 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC1P02654 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC1P02654 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
APOC1P02654 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC1P02654 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC1P02654 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC1P02654 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 FO393414.2-201ENST00000405153 598 ntBASIC13.86□□□□□ -0.19
APOC1P02654 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms