Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.12■□□□□ 0.33
CD4P01730 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CD4P01730 AC069224.1-201ENST00000566372 1715 ntBASIC17.12■□□□□ 0.33
CD4P01730 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.12■□□□□ 0.33
CD4P01730 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.12■□□□□ 0.33
CD4P01730 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.11■□□□□ 0.33
CD4P01730 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.11■□□□□ 0.33
CD4P01730 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.11■□□□□ 0.33
CD4P01730 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.11■□□□□ 0.33
CD4P01730 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.11■□□□□ 0.33
CD4P01730 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.11■□□□□ 0.33
CD4P01730 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.11■□□□□ 0.33
CD4P01730 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.11■□□□□ 0.33
CD4P01730 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.11■□□□□ 0.33
CD4P01730 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.11■□□□□ 0.33
CD4P01730 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.11■□□□□ 0.33
CD4P01730 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CD4P01730 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.11■□□□□ 0.33
CD4P01730 MIR3619-201ENST00000579667 83 ntBASIC17.11■□□□□ 0.33
CD4P01730 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.11■□□□□ 0.33
CD4P01730 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
CD4P01730 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CD4P01730 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CD4P01730 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CD4P01730 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CD4P01730 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.11■□□□□ 0.33
CD4P01730 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD4P01730 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CD4P01730 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CD4P01730 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CD4P01730 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.1■□□□□ 0.33
CD4P01730 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.1■□□□□ 0.33
CD4P01730 POM121L10P-201ENST00000436994 1285 ntBASIC17.1■□□□□ 0.33
CD4P01730 HSPB1P2-201ENST00000448722 546 ntBASIC17.1■□□□□ 0.33
CD4P01730 EIF4HP1-201ENST00000453115 687 ntBASIC17.1■□□□□ 0.33
CD4P01730 UPF3AP2-201ENST00000457924 1132 ntBASIC17.1■□□□□ 0.33
CD4P01730 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.1■□□□□ 0.33
CD4P01730 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.1■□□□□ 0.33
CD4P01730 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 CHMP4BP1-201ENST00000556017 588 ntBASIC17.1■□□□□ 0.33
CD4P01730 RN7SL48P-201ENST00000579283 293 ntBASIC17.1■□□□□ 0.33
CD4P01730 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 ECM1P1-201ENST00000604092 1279 ntBASIC17.1■□□□□ 0.33
CD4P01730 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CD4P01730 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CD4P01730 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CD4P01730 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.1■□□□□ 0.33
CD4P01730 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD4P01730 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD4P01730 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms