Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 AP001282.1-201ENST00000531301 1499 ntBASIC14.65□□□□□ -0.06
HCN1O60741 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.65□□□□□ -0.06
HCN1O60741 MRPS18AP1-201ENST00000414458 589 ntBASIC14.65□□□□□ -0.06
HCN1O60741 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 AC009477.1-201ENST00000452936 217 ntBASIC14.65□□□□□ -0.06
HCN1O60741 AL139010.1-201ENST00000454878 894 ntBASIC14.65□□□□□ -0.06
HCN1O60741 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.65□□□□□ -0.06
HCN1O60741 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.65□□□□□ -0.06
HCN1O60741 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.65□□□□□ -0.06
HCN1O60741 MIR4321-201ENST00000592276 80 ntBASIC14.65□□□□□ -0.06
HCN1O60741 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 AC138035.3-201ENST00000622706 2791 ntBASIC14.65□□□□□ -0.06
HCN1O60741 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.65□□□□□ -0.06
HCN1O60741 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCN1O60741 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.65□□□□□ -0.06
HCN1O60741 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
HCN1O60741 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
HCN1O60741 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.64□□□□□ -0.07
HCN1O60741 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HCN1O60741 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.64□□□□□ -0.07
HCN1O60741 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.64□□□□□ -0.07
HCN1O60741 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.64□□□□□ -0.07
HCN1O60741 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.64□□□□□ -0.07
HCN1O60741 MIR661-201ENST00000384842 89 ntBASIC14.64□□□□□ -0.07
HCN1O60741 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.64□□□□□ -0.07
HCN1O60741 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 AL080243.2-201ENST00000418783 582 ntBASIC14.64□□□□□ -0.07
HCN1O60741 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.64□□□□□ -0.07
HCN1O60741 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.64□□□□□ -0.07
HCN1O60741 ZNF890P-202ENST00000530367 1156 ntBASIC14.64□□□□□ -0.07
HCN1O60741 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.64□□□□□ -0.07
HCN1O60741 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.64□□□□□ -0.07
HCN1O60741 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.64□□□□□ -0.07
HCN1O60741 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.64□□□□□ -0.07
HCN1O60741 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.64□□□□□ -0.07
HCN1O60741 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HCN1O60741 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.64□□□□□ -0.07
HCN1O60741 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCN1O60741 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HCN1O60741 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.64□□□□□ -0.07
HCN1O60741 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms