Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC067930.6-201ENST00000623257 4947 ntBASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC092933.1-201ENST00000393644 945 ntBASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 NUS1P3-201ENST00000423502 862 ntBASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC016694.1-201ENST00000434179 700 ntBASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC007551.1-201ENST00000457394 519 ntBASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 FTH1P14-201ENST00000482930 551 ntBASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC084364.1-201ENST00000551967 1556 ntBASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 MSTO2P-201ENST00000314835 1709 ntBASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC004066.1-201ENST00000502488 802 ntBASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC106760.1-201ENST00000508690 800 ntBASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
C1QTNF3-AMACRE9PGA6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms