Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCHNA4D1U4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 AC114812.1-204ENST00000449669 728 ntBASIC16.57■□□□□ 0.24
LCHNA4D1U4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 RN7SL11P-201ENST00000471305 293 ntBASIC16.57■□□□□ 0.24
LCHNA4D1U4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 PPY2P-201ENST00000582808 702 ntBASIC16.57■□□□□ 0.24
LCHNA4D1U4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 MIR7845-201ENST00000618396 99 ntBASIC16.57■□□□□ 0.24
LCHNA4D1U4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LCHNA4D1U4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCHNA4D1U4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 MIR3907-201ENST00000579424 151 ntBASIC16.56■□□□□ 0.24
LCHNA4D1U4 RN7SL574P-201ENST00000581512 297 ntBASIC16.56■□□□□ 0.24
LCHNA4D1U4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 AL133499.1-201ENST00000596207 608 ntBASIC16.56■□□□□ 0.24
LCHNA4D1U4 ENPP7P14-201ENST00000621765 1040 ntBASIC16.56■□□□□ 0.24
LCHNA4D1U4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCHNA4D1U4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.56■□□□□ 0.24
LCHNA4D1U4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.55■□□□□ 0.24
LCHNA4D1U4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LCHNA4D1U4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.55■□□□□ 0.24
LCHNA4D1U4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.55■□□□□ 0.24
LCHNA4D1U4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.55■□□□□ 0.24
LCHNA4D1U4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.55■□□□□ 0.24
LCHNA4D1U4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LCHNA4D1U4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.55■□□□□ 0.24
LCHNA4D1U4 DOC2GP-204ENST00000639052 2548 ntBASIC16.55■□□□□ 0.24
LCHNA4D1U4 CYP2T1P-202ENST00000641596 2535 ntBASIC16.55■□□□□ 0.24
LCHNA4D1U4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms