Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CRB3P1-201ENST00000449338 276 ntBASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC135586.1-201ENST00000539323 574 ntBASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC012645.4-201ENST00000610691 1061 ntBASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC138035.3-201ENST00000622706 2791 ntBASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL080243.2-201ENST00000418783 582 ntBASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC009477.1-201ENST00000452936 217 ntBASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC005225.4-201ENST00000557330 545 ntBASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL844908.2-201ENST00000609461 460 ntBASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC008738.7-201ENST00000609744 511 ntBASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL662799.1-202ENST00000614205 422 ntBASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms