Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AL138918.1-201ENST00000568306 659 ntBASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AC024267.1-201ENST00000582320 895 ntBASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 AC006504.5-208ENST00000588784 2401 ntBASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 ELL2P1-201ENST00000413990 1906 ntBASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 FGD5P1-202ENST00000614866 2498 ntBASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HHLA3Q9XRX5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 BX842568.4-201ENST00000421222 227 ntBASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AC079140.1-201ENST00000508039 487 ntBASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 KRT8P23-201ENST00000560090 1207 ntBASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AC243562.1-201ENST00000560672 389 ntBASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AC073389.1-201ENST00000595595 795 ntBASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms