Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 AGAP7P-201ENST00000582299 2062 ntBASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 AGAP14-201ENST00000624701 2060 ntBASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS29Q9UBQ0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 MST1L-201ENST00000442552 2185 ntBASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 AC004449.1-201ENST00000564240 433 ntBASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 AC126755.1-201ENST00000525846 6405 ntBASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.98□□□□□ -0.01
VPS29Q9UBQ0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 TEX28P1-201ENST00000613479 1221 ntBASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 AL138828.2-201ENST00000615812 383 ntBASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 TEX28P2-201ENST00000617764 1221 ntBASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 SPDYE12P-201ENST00000618416 771 ntBASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms