Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 MIR1202-201ENST00000408529 83 ntBASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 MIR4741-201ENST00000579822 90 ntBASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 AC025181.2-201ENST00000606994 802 ntBASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 AL513523.2-202ENST00000427283 2040 ntBASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.18■□□□□ 0.18
DNMT3BQ9UBC3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 RNU1-114P-201ENST00000365297 166 ntBASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 ACTBP8-201ENST00000403258 1108 ntBASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 KLF2P2-201ENST00000416807 1039 ntBASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 KRT8P13-201ENST00000463294 1010 ntBASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 AC026691.1-201ENST00000602502 2017 ntBASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNMT3BQ9UBC3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DNMT3BQ9UBC3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms