Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 AL512361.1-201ENST00000554200 418 ntBASIC16.5■□□□□ 0.23
CD248Q9HCU0 AC010336.2-201ENST00000564226 506 ntBASIC16.5■□□□□ 0.23
CD248Q9HCU0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 TP53TG3HP-202ENST00000569755 579 ntBASIC16.5■□□□□ 0.23
CD248Q9HCU0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.5■□□□□ 0.23
CD248Q9HCU0 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.5■□□□□ 0.23
CD248Q9HCU0 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.5■□□□□ 0.23
CD248Q9HCU0 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.5■□□□□ 0.23
CD248Q9HCU0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 PRAL-201ENST00000624952 3286 ntBASIC16.5■□□□□ 0.23
CD248Q9HCU0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 ME2P1-201ENST00000426028 1970 ntBASIC16.49■□□□□ 0.23
CD248Q9HCU0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.49■□□□□ 0.23
CD248Q9HCU0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CD248Q9HCU0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD248Q9HCU0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 BTBD7P1-201ENST00000447253 1453 ntBASIC16.48■□□□□ 0.23
CD248Q9HCU0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms