Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.94■□□□□ 0.3
HIPK3Q9H422 AC016700.1-201ENST00000429424 312 ntBASIC16.94■□□□□ 0.3
HIPK3Q9H422 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.94■□□□□ 0.3
HIPK3Q9H422 MIR4722-201ENST00000578292 60 ntBASIC16.94■□□□□ 0.3
HIPK3Q9H422 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.94■□□□□ 0.3
HIPK3Q9H422 AC097724.1-201ENST00000609581 426 ntBASIC16.94■□□□□ 0.3
HIPK3Q9H422 ENPP7P14-201ENST00000621765 1040 ntBASIC16.94■□□□□ 0.3
HIPK3Q9H422 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK3Q9H422 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HIPK3Q9H422 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.94■□□□□ 0.3
HIPK3Q9H422 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK3Q9H422 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.94■□□□□ 0.3
HIPK3Q9H422 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK3Q9H422 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 MIR648-201ENST00000385046 94 ntBASIC16.93■□□□□ 0.3
HIPK3Q9H422 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 NKAIN1P1-201ENST00000435754 582 ntBASIC16.93■□□□□ 0.3
HIPK3Q9H422 AL133466.1-201ENST00000447582 150 ntBASIC16.93■□□□□ 0.3
HIPK3Q9H422 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 COX5BP1-201ENST00000507622 393 ntBASIC16.93■□□□□ 0.3
HIPK3Q9H422 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 AC044849.1-201ENST00000519737 1188 ntBASIC16.93■□□□□ 0.3
HIPK3Q9H422 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 AP001505.2-201ENST00000616815 443 ntBASIC16.93■□□□□ 0.3
HIPK3Q9H422 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK3Q9H422 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
HIPK3Q9H422 AL513477.1-201ENST00000602865 2407 ntBASIC16.92■□□□□ 0.3
HIPK3Q9H422 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 AC106886.4-201ENST00000623557 2502 ntBASIC16.92■□□□□ 0.3
HIPK3Q9H422 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 FAM8A4P-201ENST00000435433 1213 ntBASIC16.92■□□□□ 0.3
HIPK3Q9H422 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 RN7SL720P-201ENST00000488178 304 ntBASIC16.92■□□□□ 0.3
HIPK3Q9H422 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms