Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 AC109322.1-201ENST00000524499 1264 ntBASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 AL589739.1-201ENST00000607720 493 ntBASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF3BQ9BZI7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.64■□□□□ 0.58
UPF3BQ9BZI7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
UPF3BQ9BZI7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UPF3BQ9BZI7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPF3BQ9BZI7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 KRT18P64-201ENST00000434946 1219 ntBASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF3BQ9BZI7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms