Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 AC104596.2-201ENST00000512793 793 ntBASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 AC140912.1-201ENST00000577171 1054 ntBASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 SPDYE22P-201ENST00000582158 798 ntBASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 AL158212.4-201ENST00000624062 1286 ntBASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 AC092127.1-201ENST00000567093 3455 ntBASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PTCHD1Q96NR3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 RRP7BP-205ENST00000566851 833 ntBASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 TP53TG3HP-202ENST00000569755 579 ntBASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 AC036164.1-201ENST00000570544 333 ntBASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 AC099568.2-201ENST00000609194 695 ntBASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 AC007431.3-201ENST00000623221 587 ntBASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.73□□□□□ -0.05
PTCHD1Q96NR3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 RN7SL399P-201ENST00000471648 279 ntBASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 AC123567.1-201ENST00000548294 1261 ntBASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 AC093726.1-201ENST00000608064 963 ntBASIC14.72□□□□□ -0.05
PTCHD1Q96NR3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms