Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 AC008267.1-201ENST00000474858 1069 ntBASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 ISCA2P1-201ENST00000425548 448 ntBASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 AC004923.1-202ENST00000642106 209 ntBASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 AC010491.1-201ENST00000563101 2797 ntBASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
COL27A1Q8IZC6 AL359258.3-201ENST00000622910 2331 ntBASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 AL627389.1-201ENST00000413508 1182 ntBASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 ALG3P1-201ENST00000508806 1114 ntBASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 SNORD3B-2-202ENST00000571722 791 ntBASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 AC138894.2-201ENST00000602838 371 ntBASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 AL132994.2-201ENST00000603120 687 ntBASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 AC020910.5-201ENST00000623668 1865 ntBASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 AC006480.2-201ENST00000609770 1337 ntBASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.3□□□□□ -0.12
COL27A1Q8IZC6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 NDUFS6P1-201ENST00000485187 316 ntBASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 MIR4754-201ENST00000582477 89 ntBASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AL157813.1-201ENST00000612996 587 ntBASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms