Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL158212.4-201ENST00000624062 1286 ntBASIC16.59■□□□□ 0.25
RNF135Q8IUD6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF135Q8IUD6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF135Q8IUD6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF135Q8IUD6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
RNF135Q8IUD6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF135Q8IUD6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
RNF135Q8IUD6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
RNF135Q8IUD6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
RNF135Q8IUD6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
RNF135Q8IUD6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 FAM86HP-204ENST00000513466 959 ntBASIC16.58■□□□□ 0.24
RNF135Q8IUD6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 BRI3BPP1-201ENST00000594224 787 ntBASIC16.58■□□□□ 0.24
RNF135Q8IUD6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 RHOXF1P1-202ENST00000635473 501 ntBASIC16.58■□□□□ 0.24
RNF135Q8IUD6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 PAUPAR-201ENST00000630360 2965 ntBASIC16.58■□□□□ 0.24
RNF135Q8IUD6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF135Q8IUD6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 AC104306.2-201ENST00000451877 341 ntBASIC16.57■□□□□ 0.24
RNF135Q8IUD6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 ACTG1P17-201ENST00000558391 1119 ntBASIC16.57■□□□□ 0.24
RNF135Q8IUD6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 LINC01115-203ENST00000606068 577 ntBASIC16.57■□□□□ 0.24
RNF135Q8IUD6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.57■□□□□ 0.24
RNF135Q8IUD6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms