Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 MESTP3-201ENST00000503460 968 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 PGAM1P5-201ENST00000548011 764 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 AC106820.3-201ENST00000561653 397 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 AC105250.1-201ENST00000509378 2057 ntBASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 ILF3-AS1-201ENST00000591501 1983 ntBASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 AP002803.1-201ENST00000528836 498 ntBASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 AC091544.8-201ENST00000619490 361 ntBASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 CASP16P-204ENST00000635032 809 ntBASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
VPS13BQ7Z7G8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 CICP11-201ENST00000434745 2827 ntBASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 PRAL-201ENST00000624952 3286 ntBASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 NDUFS6P1-201ENST00000485187 316 ntBASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 STUB1-204ENST00000564370 875 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 AC100757.4-201ENST00000626934 759 ntBASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 CICP13-201ENST00000422015 2789 ntBASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 SERF2-206ENST00000409291 807 ntTSL 3 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 AC020922.3-201ENST00000595064 547 ntBASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms