Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 FLJ38576-201ENST00000623820 2459 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 AC074138.1-201ENST00000611182 1303 ntBASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 RNU1-114P-201ENST00000365297 166 ntBASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 HIST2H2BB-201ENST00000449108 381 ntBASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 AC114812.1-204ENST00000449669 728 ntBASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 AC100850.1-201ENST00000506768 649 ntBASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 DNM1P30-201ENST00000563586 452 ntBASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 ZACNP1-201ENST00000612259 710 ntBASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 AC051619.9-201ENST00000623237 597 ntBASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 TBC1D3J-201ENST00000620719 1426 ntBASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO4Q2I0M5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 PRORSD1P-202ENST00000563365 2154 ntBASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AL512430.1-201ENST00000392575 860 ntBASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AC136604.1-201ENST00000418535 575 ntBASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 ISCA2P1-201ENST00000425548 448 ntBASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AGGF1P2-201ENST00000426656 2106 ntBASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 MARK2P5-201ENST00000507649 634 ntBASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AC090857.1-201ENST00000527400 390 ntBASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 DNM1P51-201ENST00000558149 522 ntBASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 PRSS30P-206ENST00000641773 873 ntBASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms