Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AC105233.2-201ENST00000523697 349 ntBASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AF228730.5-201ENST00000530288 346 ntBASIC12.05□□□□□ -0.48
HIST1H1AQ02539 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AC106730.1-201ENST00000566722 1090 ntBASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AC024267.1-201ENST00000582320 895 ntBASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AC099522.2-201ENST00000607001 744 ntBASIC12.05□□□□□ -0.48
HIST1H1AQ02539 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 FAM197Y3-203ENST00000618346 717 ntBASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AC091812.2-201ENST00000619081 385 ntBASIC12.05□□□□□ -0.48
HIST1H1AQ02539 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.05□□□□□ -0.48
HIST1H1AQ02539 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 AC134407.2-201ENST00000625089 1978 ntBASIC12.05□□□□□ -0.48
HIST1H1AQ02539 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HIST1H1AQ02539 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AC136621.1-201ENST00000624017 2304 ntBASIC12.04□□□□□ -0.48
HIST1H1AQ02539 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AL109954.1-202ENST00000564051 2148 ntBASIC12.04□□□□□ -0.48
HIST1H1AQ02539 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.04□□□□□ -0.48
HIST1H1AQ02539 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AL671277.1-201ENST00000429656 993 ntBASIC12.04□□□□□ -0.48
HIST1H1AQ02539 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AC098859.1-201ENST00000502915 1238 ntBASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AL135744.1-201ENST00000565098 629 ntBASIC12.04□□□□□ -0.48
HIST1H1AQ02539 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AL138918.1-201ENST00000568306 659 ntBASIC12.04□□□□□ -0.48
HIST1H1AQ02539 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AC007191.1-201ENST00000623179 2995 ntBASIC12.04□□□□□ -0.48
HIST1H1AQ02539 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms