Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TSSK5P-201ENST00000423978 907 ntBASIC13.66□□□□□ -0.22
HIST1H3AP68431 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST1H3AP68431 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.66□□□□□ -0.22
HIST1H3AP68431 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.66□□□□□ -0.22
HIST1H3AP68431 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST1H3AP68431 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
HIST1H3AP68431 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 AL109936.8-201ENST00000641772 604 ntBASIC13.66□□□□□ -0.22
HIST1H3AP68431 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 AC138969.3-201ENST00000546612 1459 ntBASIC13.66□□□□□ -0.22
HIST1H3AP68431 AC138932.2-201ENST00000548268 1459 ntBASIC13.66□□□□□ -0.22
HIST1H3AP68431 AC126755.4-201ENST00000549796 1459 ntBASIC13.66□□□□□ -0.22
HIST1H3AP68431 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H3AP68431 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HIST1H3AP68431 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AC023024.2-201ENST00000623561 1993 ntBASIC13.65□□□□□ -0.22
HIST1H3AP68431 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 METTL21AP1-201ENST00000438852 635 ntBASIC13.65□□□□□ -0.22
HIST1H3AP68431 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AC009477.1-201ENST00000452936 217 ntBASIC13.65□□□□□ -0.22
HIST1H3AP68431 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AC044860.1-202ENST00000559481 777 ntBASIC13.65□□□□□ -0.22
HIST1H3AP68431 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 AL645728.2-202ENST00000641679 227 ntBASIC13.65□□□□□ -0.22
HIST1H3AP68431 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.65□□□□□ -0.22
HIST1H3AP68431 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 MROH4P-201ENST00000431302 1578 ntBASIC13.65□□□□□ -0.22
HIST1H3AP68431 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H3AP68431 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H3AP68431 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
HIST1H3AP68431 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms