Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 C1QBPP1-201ENST00000400117 770 ntBASIC17.01■□□□□ 0.31
NCKAP1LP55160 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 AL596325.1-201ENST00000563991 1082 ntBASIC17.01■□□□□ 0.31
NCKAP1LP55160 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 AC133539.2-201ENST00000604757 467 ntBASIC17.01■□□□□ 0.31
NCKAP1LP55160 AC093813.1-201ENST00000605066 256 ntBASIC17.01■□□□□ 0.31
NCKAP1LP55160 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 CICP11-201ENST00000434745 2827 ntBASIC17.01■□□□□ 0.31
NCKAP1LP55160 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
NCKAP1LP55160 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17■□□□□ 0.31
NCKAP1LP55160 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17■□□□□ 0.31
NCKAP1LP55160 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17■□□□□ 0.31
NCKAP1LP55160 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 AC098614.1-201ENST00000368528 745 ntBASIC17■□□□□ 0.31
NCKAP1LP55160 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17■□□□□ 0.31
NCKAP1LP55160 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17■□□□□ 0.31
NCKAP1LP55160 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17■□□□□ 0.31
NCKAP1LP55160 RN7SL692P-201ENST00000464677 288 ntBASIC17■□□□□ 0.31
NCKAP1LP55160 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17■□□□□ 0.31
NCKAP1LP55160 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17■□□□□ 0.31
NCKAP1LP55160 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17■□□□□ 0.31
NCKAP1LP55160 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 AC105233.6-201ENST00000642093 218 ntBASIC17■□□□□ 0.31
NCKAP1LP55160 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 AL109954.1-202ENST00000564051 2148 ntBASIC17■□□□□ 0.31
NCKAP1LP55160 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17■□□□□ 0.31
NCKAP1LP55160 AL138799.1-201ENST00000448213 1675 ntBASIC17■□□□□ 0.31
NCKAP1LP55160 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17■□□□□ 0.31
NCKAP1LP55160 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCKAP1LP55160 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
NCKAP1LP55160 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKAP1LP55160 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.99■□□□□ 0.31
NCKAP1LP55160 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.99■□□□□ 0.31
NCKAP1LP55160 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKAP1LP55160 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NCKAP1LP55160 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKAP1LP55160 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCKAP1LP55160 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKAP1LP55160 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKAP1LP55160 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.99■□□□□ 0.31
NCKAP1LP55160 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
NCKAP1LP55160 AC126177.1-201ENST00000547829 2218 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms