Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PSMD4P55036 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PSMD4P55036 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PSMD4P55036 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PSMD4P55036 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PSMD4P55036 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PSMD4P55036 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PSMD4P55036 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PSMD4P55036 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PSMD4P55036 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PSMD4P55036 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PSMD4P55036 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PSMD4P55036 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.59□□□□□ -0.07
PSMD4P55036 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.59□□□□□ -0.07
PSMD4P55036 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.59□□□□□ -0.07
PSMD4P55036 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.59□□□□□ -0.07
PSMD4P55036 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.59□□□□□ -0.07
PSMD4P55036 BASP1P1-201ENST00000430708 665 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 AC055876.3-201ENST00000431496 288 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
PSMD4P55036 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.59□□□□□ -0.07
PSMD4P55036 ZNF890P-202ENST00000530367 1156 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.59□□□□□ -0.07
PSMD4P55036 RFPL4AP1-201ENST00000530883 850 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 DUX4L27-201ENST00000554796 1261 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.59□□□□□ -0.07
PSMD4P55036 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PSMD4P55036 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.59□□□□□ -0.07
PSMD4P55036 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.59□□□□□ -0.07
PSMD4P55036 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.59□□□□□ -0.07
PSMD4P55036 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.59□□□□□ -0.07
PSMD4P55036 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.59□□□□□ -0.07
PSMD4P55036 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PSMD4P55036 AC074044.1-201ENST00000609673 707 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 AC138649.4-201ENST00000612222 287 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 AC093512.1-201ENST00000617969 520 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 AL590560.3-201ENST00000623350 461 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.59□□□□□ -0.07
PSMD4P55036 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.59□□□□□ -0.07
PSMD4P55036 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 AC105250.1-201ENST00000509378 2057 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 Z97205.2-201ENST00000564697 1639 ntBASIC14.59□□□□□ -0.07
PSMD4P55036 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PSMD4P55036 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.59□□□□□ -0.07
PSMD4P55036 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
PSMD4P55036 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PSMD4P55036 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.58□□□□□ -0.07
PSMD4P55036 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PSMD4P55036 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.58□□□□□ -0.07
PSMD4P55036 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
PSMD4P55036 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
PSMD4P55036 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
PSMD4P55036 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
PSMD4P55036 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PSMD4P55036 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.58□□□□□ -0.07
PSMD4P55036 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PSMD4P55036 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PSMD4P55036 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PSMD4P55036 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.58□□□□□ -0.08
PSMD4P55036 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PSMD4P55036 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PSMD4P55036 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PSMD4P55036 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PSMD4P55036 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.58□□□□□ -0.08
PSMD4P55036 AC092580.3-201ENST00000430932 139 ntBASIC14.58□□□□□ -0.08
PSMD4P55036 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.58□□□□□ -0.08
PSMD4P55036 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
PSMD4P55036 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.58□□□□□ -0.08
PSMD4P55036 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.58□□□□□ -0.08
PSMD4P55036 AC025048.3-201ENST00000590609 569 ntBASIC14.58□□□□□ -0.08
PSMD4P55036 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.58□□□□□ -0.08
PSMD4P55036 AC005702.4-201ENST00000618393 416 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms