Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.63□□□□□ -0.23
ATP1B3P54709 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.63□□□□□ -0.23
ATP1B3P54709 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
ATP1B3P54709 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ATP1B3P54709 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 AL136982.4-201ENST00000437689 1740 ntBASIC13.63□□□□□ -0.23
ATP1B3P54709 LINC00528-201ENST00000600723 2160 ntBASIC13.63□□□□□ -0.23
ATP1B3P54709 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ATP1B3P54709 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ATP1B3P54709 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 AC018892.3-201ENST00000623986 2499 ntBASIC13.63□□□□□ -0.23
ATP1B3P54709 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ATP1B3P54709 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.62□□□□□ -0.23
ATP1B3P54709 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ATP1B3P54709 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.62□□□□□ -0.23
ATP1B3P54709 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.62□□□□□ -0.23
ATP1B3P54709 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.62□□□□□ -0.23
ATP1B3P54709 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.62□□□□□ -0.23
ATP1B3P54709 MIR4313-201ENST00000580760 101 ntBASIC13.62□□□□□ -0.23
ATP1B3P54709 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.62□□□□□ -0.23
ATP1B3P54709 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.62□□□□□ -0.23
ATP1B3P54709 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ATP1B3P54709 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ATP1B3P54709 CYP4F24P-201ENST00000586049 1580 ntBASIC13.62□□□□□ -0.23
ATP1B3P54709 AP3S2-216ENST00000617003 1561 ntBASIC13.62□□□□□ -0.23
ATP1B3P54709 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATP1B3P54709 AC007191.1-201ENST00000623179 2995 ntBASIC13.62□□□□□ -0.23
ATP1B3P54709 GRK6P1-201ENST00000400595 1711 ntBASIC13.61□□□□□ -0.23
ATP1B3P54709 LINC01101-201ENST00000622953 1884 ntBASIC13.61□□□□□ -0.23
ATP1B3P54709 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.61□□□□□ -0.23
ATP1B3P54709 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms