Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL691432.1-201ENST00000596308 1422 ntBASIC15.85■□□□□ 0.13
RPA3P35244 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
RPA3P35244 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPA3P35244 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RPA3P35244 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RPA3P35244 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.84■□□□□ 0.13
RPA3P35244 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RPA3P35244 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.84■□□□□ 0.13
RPA3P35244 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.84■□□□□ 0.13
RPA3P35244 AC004461.1-201ENST00000412461 403 ntBASIC15.84■□□□□ 0.13
RPA3P35244 AC254562.1-201ENST00000417586 456 ntBASIC15.84■□□□□ 0.13
RPA3P35244 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.84■□□□□ 0.13
RPA3P35244 AP006288.1-201ENST00000446065 395 ntBASIC15.84■□□□□ 0.13
RPA3P35244 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.84■□□□□ 0.13
RPA3P35244 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.84■□□□□ 0.13
RPA3P35244 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.84■□□□□ 0.13
RPA3P35244 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RPA3P35244 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 AC073389.1-201ENST00000595595 795 ntBASIC15.84■□□□□ 0.13
RPA3P35244 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.84■□□□□ 0.13
RPA3P35244 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
RPA3P35244 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 ZBED1P1-201ENST00000502364 1930 ntBASIC15.84■□□□□ 0.13
RPA3P35244 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPA3P35244 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPA3P35244 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RPA3P35244 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPA3P35244 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPA3P35244 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPA3P35244 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.83■□□□□ 0.13
RPA3P35244 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RPA3P35244 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RPA3P35244 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RPA3P35244 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPA3P35244 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPA3P35244 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.83■□□□□ 0.13
RPA3P35244 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RPA3P35244 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RPA3P35244 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.83■□□□□ 0.12
RPA3P35244 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 CNN2P11-201ENST00000429351 262 ntBASIC15.83■□□□□ 0.12
RPA3P35244 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.83■□□□□ 0.12
RPA3P35244 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.83■□□□□ 0.12
RPA3P35244 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.83■□□□□ 0.12
RPA3P35244 AC069335.1-201ENST00000489972 472 ntBASIC15.83■□□□□ 0.12
RPA3P35244 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.83■□□□□ 0.12
RPA3P35244 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.83■□□□□ 0.12
RPA3P35244 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.83■□□□□ 0.12
RPA3P35244 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RPA3P35244 AC243562.2-201ENST00000561247 970 ntBASIC15.83■□□□□ 0.12
RPA3P35244 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.83■□□□□ 0.12
RPA3P35244 AP000842.3-202ENST00000569238 1080 ntBASIC15.83■□□□□ 0.12
RPA3P35244 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.83■□□□□ 0.12
RPA3P35244 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.83■□□□□ 0.12
RPA3P35244 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RPA3P35244 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.83■□□□□ 0.12
RPA3P35244 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms