Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
USP6P35125 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.67■□□□□ 0.9
USP6P35125 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.67■□□□□ 0.9
USP6P35125 RN7SL574P-201ENST00000581512 297 ntBASIC20.67■□□□□ 0.9
USP6P35125 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.67■□□□□ 0.9
USP6P35125 BNIP3P13-201ENST00000599968 566 ntBASIC20.67■□□□□ 0.9
USP6P35125 AC138696.2-201ENST00000607376 223 ntBASIC20.67■□□□□ 0.9
USP6P35125 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.67■□□□□ 0.9
USP6P35125 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.67■□□□□ 0.9
USP6P35125 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.67■□□□□ 0.9
USP6P35125 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.67■□□□□ 0.9
USP6P35125 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.67■□□□□ 0.9
USP6P35125 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.67■□□□□ 0.9
USP6P35125 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 TUBBP5-203ENST00000508529 1334 ntBASIC20.66■□□□□ 0.9
USP6P35125 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
USP6P35125 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
USP6P35125 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.66■□□□□ 0.9
USP6P35125 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.66■□□□□ 0.9
USP6P35125 ACTG1P2-201ENST00000415776 1125 ntBASIC20.66■□□□□ 0.9
USP6P35125 ACTG1P11-201ENST00000425411 1125 ntBASIC20.66■□□□□ 0.9
USP6P35125 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.66■□□□□ 0.9
USP6P35125 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.66■□□□□ 0.9
USP6P35125 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC20.66■□□□□ 0.9
USP6P35125 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.66■□□□□ 0.9
USP6P35125 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.66■□□□□ 0.9
USP6P35125 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.66■□□□□ 0.9
USP6P35125 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6P35125 AC105250.1-201ENST00000509378 2057 ntBASIC20.66■□□□□ 0.9
USP6P35125 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.65■□□□□ 0.9
USP6P35125 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.65■□□□□ 0.9
USP6P35125 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
USP6P35125 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.65■□□□□ 0.9
USP6P35125 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.65■□□□□ 0.9
USP6P35125 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
USP6P35125 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.65■□□□□ 0.9
USP6P35125 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.65■□□□□ 0.9
USP6P35125 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC20.65■□□□□ 0.9
USP6P35125 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.65■□□□□ 0.9
USP6P35125 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
USP6P35125 AC026740.1-201ENST00000607068 791 ntBASIC20.65■□□□□ 0.9
USP6P35125 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.65■□□□□ 0.9
USP6P35125 AL023803.2-201ENST00000620080 638 ntBASIC20.65■□□□□ 0.9
USP6P35125 AL162426.1-201ENST00000624141 743 ntBASIC20.65■□□□□ 0.9
USP6P35125 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.65■□□□□ 0.9
USP6P35125 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.65■□□□□ 0.9
USP6P35125 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 AC009093.2-202ENST00000620513 2079 ntBASIC20.65■□□□□ 0.9
USP6P35125 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
USP6P35125 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
USP6P35125 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.65■□□□□ 0.9
USP6P35125 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP6P35125 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.64■□□□□ 0.9
USP6P35125 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP6P35125 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP6P35125 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
USP6P35125 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP6P35125 AC008132.1-202ENST00000342005 1389 ntBASIC20.64■□□□□ 0.9
USP6P35125 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.64■□□□□ 0.89
USP6P35125 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 AC091046.1-201ENST00000331871 207 ntBASIC20.64■□□□□ 0.89
USP6P35125 MIR769-201ENST00000390225 118 ntBASIC20.64■□□□□ 0.89
USP6P35125 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.64■□□□□ 0.89
USP6P35125 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.64■□□□□ 0.89
USP6P35125 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.64■□□□□ 0.89
USP6P35125 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 RN7SL769P-201ENST00000469386 295 ntBASIC20.64■□□□□ 0.89
USP6P35125 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC20.64■□□□□ 0.89
USP6P35125 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
USP6P35125 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC20.64■□□□□ 0.89
USP6P35125 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms