Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
TM4SF1P30408 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.03■□□□□ 0.64
TM4SF1P30408 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF1P30408 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.03■□□□□ 0.64
TM4SF1P30408 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF1P30408 AC026316.1-201ENST00000398900 414 ntBASIC19.03■□□□□ 0.64
TM4SF1P30408 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.03■□□□□ 0.64
TM4SF1P30408 MIR4750-201ENST00000584564 56 ntBASIC19.03■□□□□ 0.64
TM4SF1P30408 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.03■□□□□ 0.64
TM4SF1P30408 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.03■□□□□ 0.64
TM4SF1P30408 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TM4SF1P30408 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF1P30408 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.03■□□□□ 0.64
TM4SF1P30408 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TM4SF1P30408 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF1P30408 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
TM4SF1P30408 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF1P30408 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.02■□□□□ 0.64
TM4SF1P30408 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TM4SF1P30408 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TM4SF1P30408 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.02■□□□□ 0.64
TM4SF1P30408 GHSR-202ENST00000427970 912 ntBASIC19.02■□□□□ 0.64
TM4SF1P30408 AL353637.1-201ENST00000451571 732 ntBASIC19.02■□□□□ 0.64
TM4SF1P30408 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.02■□□□□ 0.64
TM4SF1P30408 AC116345.2-201ENST00000512837 523 ntBASIC19.02■□□□□ 0.64
TM4SF1P30408 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
TM4SF1P30408 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.02■□□□□ 0.64
TM4SF1P30408 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF1P30408 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TM4SF1P30408 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF1P30408 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.02■□□□□ 0.64
TM4SF1P30408 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TM4SF1P30408 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF1P30408 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.02■□□□□ 0.64
TM4SF1P30408 AC103691.2-201ENST00000618824 433 ntBASIC19.02■□□□□ 0.64
TM4SF1P30408 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC19.02■□□□□ 0.64
TM4SF1P30408 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF1P30408 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
TM4SF1P30408 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TM4SF1P30408 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF1P30408 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
TM4SF1P30408 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF1P30408 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF1P30408 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF1P30408 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF1P30408 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF1P30408 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF1P30408 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.02■□□□□ 0.63
TM4SF1P30408 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.01■□□□□ 0.63
TM4SF1P30408 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
TM4SF1P30408 RN7SKP214-201ENST00000364208 315 ntBASIC19.01■□□□□ 0.63
TM4SF1P30408 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 ISCA2P1-201ENST00000425548 448 ntBASIC19.01■□□□□ 0.63
TM4SF1P30408 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
TM4SF1P30408 RPL18P13-201ENST00000478088 569 ntBASIC19.01■□□□□ 0.63
TM4SF1P30408 AC026434.2-201ENST00000506094 1078 ntBASIC19.01■□□□□ 0.63
TM4SF1P30408 AC019193.1-201ENST00000506678 823 ntBASIC19.01■□□□□ 0.63
TM4SF1P30408 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.01■□□□□ 0.63
TM4SF1P30408 AC242376.1-201ENST00000559033 726 ntBASIC19.01■□□□□ 0.63
TM4SF1P30408 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.01■□□□□ 0.63
TM4SF1P30408 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF1P30408 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.01■□□□□ 0.63
TM4SF1P30408 AL136301.1-201ENST00000615830 422 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms